[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 75 items for (author: huang & hd)

EMDB-35419:
Cryo-EM structure of monomeric SPARTA gRNA-ssDNA target complex
Method: single particle / : Zhang JT, Jia N, Huang HD

EMDB-35420:
Cryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state1
Method: single particle / : Zhang JT, Jia N, Huang HD

EMDB-35421:
Cryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2
Method: single particle / : Zhang JT, Jia N, Huang HD

EMDB-36843:
Cryo-EM structure of SPARTA gRNA binary complex
Method: single particle / : Zhang JT, Jia N, Huang HD

EMDB-33180:
CryoEM structure of type IV-A Csf-crRNAsp14-dsDNA ternary complex
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33181:
CryoEM structure of type IV-A Csf-crRNA-dsDNA ternary complex
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33183:
CryoEM structure of type IV-A NTS-nicked dsDNA bound Csf-crRNA ternary complex
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33184:
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33185:
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex in a second state
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33182:
CryoEM structure of type IV-A Csf-crRNA binary complex
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-14504:
Three-dimensional structure of myosin binding protein C in rat cardiac muscle
Method: subtomogram averaging / : Luther PK, Morris EP, Huang X, Jun L

EMDB-28523:
Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies
Method: single particle / : Franklin MC, Romero Hernandez A

PDB-8epa:
Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies
Method: single particle / : Franklin MC, Romero Hernandez A

EMDB-33676:
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA binary complex
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33677:
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA complex bound to non-self RNA target
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33678:
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA complex bound to self RNA target
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33679:
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to non-self RNA target
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33680:
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-33681:
CryoEM structure of type III-E CRISPR Craspase gRAMP-crRNA in complex with TPR-CHAT protease bound to self RNA target
Method: single particle / : Zhang JT, Cui N, Huang HD, Jia N

EMDB-0486:
Negative stain EM map of MERS 2 in complex with G2 Fab
Method: single particle / : Ward AB, Turner HL, McLellan JS, Wang N

EMDB-20527:
MERS S0 trimer in complex with antibody G2
Method: single particle / : Bowman CA, Pallesen J, Ward AB

PDB-6pz8:
MERS S0 trimer in complex with variable domain of antibody G2
Method: single particle / : Bowman CA, Pallesen J, Ward AB

EMDB-7573:
SARS Spike Glycoprotein, Stabilized variant, C3 symmetry
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7574:
SARS Spike Glycoprotein, Stabilized variant, single upwards S1 CTD conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7575:
SARS Spike Glycoprotein, Stabilized variant, two S1 CTDs in the upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7576:
SARS spike glycoprotein, stabilized variant, three S1 CTDs in an upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7577:
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, C3 symmetry
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7578:
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, one S1 CTD in an upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7579:
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, two S1 CTDs in an upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7580:
SARS spike glycoprotein, trypsin-cleaved, stabilized variant, three S1 CTDs in an upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7581:
SARS spike glycoprotein, trypsin-cleaved, stabilized variant, three S1 CTDs in a downwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7582:
SARS Spike Glycoprotein - human ACE2 complex, Stabilized variant, all ACE2-bound particles
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7584:
SARS spike glycoprotein, stabilized variant, ACE2-bound dataset, S1 CTD configuration: upwards, downwards, downwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7585:
SARS spike glycoprotein, stabilized variant, ACE2-bound dataset, S1 CTD configuration: upwards, upwards, downwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7586:
SARS spike glycoprotein, stabilized variant, S1 CTD configuration: ACE2-bound, downwards, downwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7601:
SARS spike glycoprotein, stabilized variant, S1 CTD configuration: ACE2-bound, downwards, upwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7602:
SARS spike glycoprotein, stabilized variant, S1 CTD configuration: ACE2-bound, upwards, downwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7603:
SARS spike glycoprotein, stabilized variant, S1 CTD configurations: ACE2-bound, upwards, upwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7604:
SARS spike glycoprotein, stabilized variant, S1 CTD configurations: ACE2-bound, ACE2-bound, downwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7605:
SARS spike glycoprotein, stabilized variant, S1 CTD configurations: ACE2-bound, ACE2-bound, upwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7606:
SARS spike glycoprotein, stabilized variant, S1 CTD configurations: ACE2-bound, ACE2-bound, ACE2-bound
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7607:
SARS spike glycoprotein, stabilized variant, S1 CTD configurations: ACE2-bound, upwards/downwards mix, downwards
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

EMDB-7608:
SARS spike glycoprotein, focused refinement of S1 CTD bound to ACE2
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

PDB-6crv:
SARS Spike Glycoprotein, Stabilized variant, C3 symmetry
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

PDB-6crw:
SARS Spike Glycoprotein, Stabilized variant, single upwards S1 CTD conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

PDB-6crx:
SARS Spike Glycoprotein, Stabilized variant, two S1 CTDs in the upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

PDB-6crz:
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, C3 symmetry
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

PDB-6cs0:
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, one S1 CTD in an upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

PDB-6cs1:
SARS Spike Glycoprotein, Trypsin-cleaved, Stabilized variant, two S1 CTDs in an upwards conformation
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

PDB-6cs2:
SARS Spike Glycoprotein - human ACE2 complex, Stabilized variant, all ACE2-bound particles
Method: single particle / : Kirchdoerfer RN, Wang N, Pallesen J, Turner HL, Cottrell CA, McLellan JS, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more